DNA BASER Sequence Assembler 3.5
DNA Baser Assembler is easy to use software for simple and batch DNA sequence assembly, DNA sequence analysis, contig editing, metadata integration and mutation detection. It also offers a powerful chromatogram viewer/editor. The truly user-friendly interface makes DNA Baser the best choice for DNA contig assembly. For more details, see the DNA BASER Features page.
Why is DNA Baser Assembler special?
Any software company pretends that their product is the best. But let`s see for real if DNA Baser can offer you a better proposition. As you will see below we concentrate on adding automatic and batch functions to our product in order to decrease the time. Additional to this, DNA Baser is available at a "kill your competition" price.
Forget about manually trimming the low quality ends of your sequences. DNA Baser Assembler will do it for you!
Do you think you need weeks to assemble hundreds of contigs? What about doing this in minutes? DNA Baser is the only software that can automatically detect and assemble sequences belonging to the same contig based on their filename.
Do you think that is necessary to spend more than 20 minutes to correct discrepancies and mismatches in every contig? Wrong! DNA Baser is the first software which can make correct suggestions in at least 98% of cases.
Have you ever wondered how others laboratories afford to have sequence assembly software in EVERY computer? Simple! They don`t spend thousands of dollars for each license. They use DNA Baser Assembler. DNA Baser is affordable, has no annual maintenance fees, technical support is included in price and you have instant access to your key, right after purchase.
You don`t have to fill in and submit forms in order to get a trial version. If you want to try it, you can download and install it in less than one minute. No personal data or registration process is required. The trial version is fully functional.
DNA BASER Assembler offers a smart navigation system that takes you to the location of each sequence ambiguity / mutation with a single click.
Type : Freeware » EULA
OS Support : Windows All + Vista
Date stamp / Size : Feb, 1. 2007 / 1322 kBytes
Asked : CPU: 333MHz, 64MB RAM, Video 1024x768, 2MB HDD free space
Update history of DNA BASER Sequence Assembler
v3.5 (May, 1. 2012)
New: Metadata and batch metadata integration.
New: Open Windows Explorer in contig's folder, after sequence assembly.
New: Remove vectors from single chromatograms.
New: SEQUENCE ANALISYS - mark al bases with a confidence level (QV) below a specified threshold, in red.
New: Batch convert from chromatogram to Fasta with vector removal and automatic metadata integration.
New: Resizable chromatograms.
Full support for low quality sample ends editing.
100% compatible with Mac via Parallels/Bootcamp/VMWare.
Improved handling of corrupted/invalid ABI/SCF files.
Improved contig editor.
Improved file association.
Improved 'Assemble to reference'.
Improved log window.
Improved file handling: Before starting the contig, check if all files in the JobList are valid. Invalid samples are automatically removed from Job List so the assembly process can continue without human intervention. Build a list of invalid files and report it.
Improved user interface: new toolbar, improved embedded help, interactive help, workflow...
Improved sample viewer: 'Mark as trusted/un-trusted' can now be used also in Sample viewer window
New: Show error message while trying to open empty/invalid FASTA files
Improved: Correctly handle multiple contigs resulted when assembling to a reference.
Improved: menu 'Save as Fasta/Seq/Scf' was replaced with 'Save all as...' and 'Save selected as...'. Now the user can choose where to save the file.
New: Open Windows Explorer in contig's folder, after sequence assembly.
New: Remove vectors from single chromatograms.
New: SEQUENCE ANALISYS - mark al bases with a confidence level (QV) below a specified threshold, in red.
New: Batch convert from chromatogram to Fasta with vector removal and automatic metadata integration.
New: Resizable chromatograms.
Full support for low quality sample ends editing.
100% compatible with Mac via Parallels/Bootcamp/VMWare.
Improved handling of corrupted/invalid ABI/SCF files.
Improved contig editor.
Improved file association.
Improved 'Assemble to reference'.
Improved log window.
Improved file handling: Before starting the contig, check if all files in the JobList are valid. Invalid samples are automatically removed from Job List so the assembly process can continue without human intervention. Build a list of invalid files and report it.
Improved user interface: new toolbar, improved embedded help, interactive help, workflow...
Improved sample viewer: 'Mark as trusted/un-trusted' can now be used also in Sample viewer window
New: Show error message while trying to open empty/invalid FASTA files
Improved: Correctly handle multiple contigs resulted when assembling to a reference.
Improved: menu 'Save as Fasta/Seq/Scf' was replaced with 'Save all as...' and 'Save selected as...'. Now the user can choose where to save the file.
v3.2.4 (July, 16. 2011)
New: Metadata and batch metadata integration.
New: Open Windows Explorer in contig's folder, after sequence assembly.
New: Remove vectors from single chromatograms.
New: SEQUENCE ANALISYS - mark al bases with a confidence level (QV) below a specified threshold, in red.
New: Batch convert from chromatogram to Fasta with vector removal and automatic metadata integration.
New: Resizable chromatograms.
Full support for low quality sample ends editing.
100% compatible with Mac via Parallels/Bootcamp/VMWare.
Improved handling of corrupted/invalid ABI/SCF files.
Improved contig editor.
Improved file association.
Improved 'Assemble to reference'.
Improved log window.
Improved file handling: Before starting the contig, check if all files in the JobList are valid. Invalid samples are automatically removed from Job List so the assembly process can continue without human intervention. Build a list of invalid files and report it.
Improved user interface: new toolbar, improved embedded help, interactive help, workflow...
Improved sample viewer: 'Mark as trusted/un-trusted' can now be used also in Sample viewer window
New: Show error message while trying to open empty/invalid FASTA files
Improved: Correctly handle multiple contigs resulted when assembling to a reference.
Improved: menu 'Save as Fasta/Seq/Scf' was replaced with 'Save all as...' and 'Save selected as...'. Now the user can choose where to save the file.
New: Open Windows Explorer in contig's folder, after sequence assembly.
New: Remove vectors from single chromatograms.
New: SEQUENCE ANALISYS - mark al bases with a confidence level (QV) below a specified threshold, in red.
New: Batch convert from chromatogram to Fasta with vector removal and automatic metadata integration.
New: Resizable chromatograms.
Full support for low quality sample ends editing.
100% compatible with Mac via Parallels/Bootcamp/VMWare.
Improved handling of corrupted/invalid ABI/SCF files.
Improved contig editor.
Improved file association.
Improved 'Assemble to reference'.
Improved log window.
Improved file handling: Before starting the contig, check if all files in the JobList are valid. Invalid samples are automatically removed from Job List so the assembly process can continue without human intervention. Build a list of invalid files and report it.
Improved user interface: new toolbar, improved embedded help, interactive help, workflow...
Improved sample viewer: 'Mark as trusted/un-trusted' can now be used also in Sample viewer window
New: Show error message while trying to open empty/invalid FASTA files
Improved: Correctly handle multiple contigs resulted when assembling to a reference.
Improved: menu 'Save as Fasta/Seq/Scf' was replaced with 'Save all as...' and 'Save selected as...'. Now the user can choose where to save the file.
v2.93 (November, 28. 2010)
New: Metadata and batch metadata integration.
New: Button to open Windows Explorer in contig's folder, after sequence assembly.
New: Remove vectors from single chromatograms.
New: SEQUENCE ANALISYS - mark al bases with a confidence level (QV) below a specified threshold, in red.
New: Batch convert from chromatogram to Fasta with vector removal and automatic metadata integration.
New: Resizable chromatograms.
Full support for low quality sample ends editing.
100% compatible with Mac via Parallels/Bootcamp/VMWare.
Improved handling of corrupted/invalid ABI/SCF files.
Improved contig editor.
Improved file association.
Improved 'Assemble to reference'.
Improved log window.
Improved file handling: Before starting the contig, check if all files in the JobList are valid. Invalid samples are automatically removed from Job List so the assembly process can continue without human intervention. Build a list of invalid files and report it.
Improved user interface: new toolbar, improved embedded help, interactive help, workflow...
Improved sample viewer: 'Mark as trusted/un-trusted' can now be used also in Sample viewer window
New: Show error message while trying to open empty/invalid FASTA files
Improved: Correctly handle multiple contigs resulted when assembling to a reference.
Improved: menu 'Save as Fasta/Seq/Scf' was replaced with 'Save all as...' and 'Save selected as...'. Now the user can choose where to save the file.
New: Button to open Windows Explorer in contig's folder, after sequence assembly.
New: Remove vectors from single chromatograms.
New: SEQUENCE ANALISYS - mark al bases with a confidence level (QV) below a specified threshold, in red.
New: Batch convert from chromatogram to Fasta with vector removal and automatic metadata integration.
New: Resizable chromatograms.
Full support for low quality sample ends editing.
100% compatible with Mac via Parallels/Bootcamp/VMWare.
Improved handling of corrupted/invalid ABI/SCF files.
Improved contig editor.
Improved file association.
Improved 'Assemble to reference'.
Improved log window.
Improved file handling: Before starting the contig, check if all files in the JobList are valid. Invalid samples are automatically removed from Job List so the assembly process can continue without human intervention. Build a list of invalid files and report it.
Improved user interface: new toolbar, improved embedded help, interactive help, workflow...
Improved sample viewer: 'Mark as trusted/un-trusted' can now be used also in Sample viewer window
New: Show error message while trying to open empty/invalid FASTA files
Improved: Correctly handle multiple contigs resulted when assembling to a reference.
Improved: menu 'Save as Fasta/Seq/Scf' was replaced with 'Save all as...' and 'Save selected as...'. Now the user can choose where to save the file.
v2.92 (November, 16. 2010)
New: Metadata and batch metadata integration.
New: Button to open Windows Explorer in contig's folder, after sequence assembly.
New: Remove vectors from single chromatograms.
New: SEQUENCE ANALISYS - mark al bases with a confidence level (QV) below a specified threshold, in red.
New: Batch convert from chromatogram to Fasta with vector removal and automatic metadata integration.
New: Resizable chromatograms.
Full support for low quality sample ends editing.
100% compatible with Mac via Parallels/Bootcamp/VMWare.
Improved handling of corrupted/invalid ABI/SCF files.
Improved contig editor.
Improved file association.
Improved 'Assemble to reference'.
Improved log window.
Improved file handling: Before starting the contig, check if all files in the JobList are valid. Invalid samples are automatically removed from Job List so the assembly process can continue without human intervention. Build a list of invalid files and report it.
Improved user interface: new toolbar, improved embedded help, interactive help, workflow...
Improved sample viewer: 'Mark as trusted/un-trusted' can now be used also in Sample viewer window
New: Show error message while trying to open empty/invalid FASTA files
Improved: Correctly handle multiple contigs resulted when assembling to a reference.
Improved: menu 'Save as Fasta/Seq/Scf' was replaced with 'Save all as...' and 'Save selected as...'. Now the user can choose where to save the file.
New: Button to open Windows Explorer in contig's folder, after sequence assembly.
New: Remove vectors from single chromatograms.
New: SEQUENCE ANALISYS - mark al bases with a confidence level (QV) below a specified threshold, in red.
New: Batch convert from chromatogram to Fasta with vector removal and automatic metadata integration.
New: Resizable chromatograms.
Full support for low quality sample ends editing.
100% compatible with Mac via Parallels/Bootcamp/VMWare.
Improved handling of corrupted/invalid ABI/SCF files.
Improved contig editor.
Improved file association.
Improved 'Assemble to reference'.
Improved log window.
Improved file handling: Before starting the contig, check if all files in the JobList are valid. Invalid samples are automatically removed from Job List so the assembly process can continue without human intervention. Build a list of invalid files and report it.
Improved user interface: new toolbar, improved embedded help, interactive help, workflow...
Improved sample viewer: 'Mark as trusted/un-trusted' can now be used also in Sample viewer window
New: Show error message while trying to open empty/invalid FASTA files
Improved: Correctly handle multiple contigs resulted when assembling to a reference.
Improved: menu 'Save as Fasta/Seq/Scf' was replaced with 'Save all as...' and 'Save selected as...'. Now the user can choose where to save the file.
v2.91 (October, 13. 2010)
New: Metadata and batch metadata integration.
New: Button to open Windows Explorer in contig's folder, after sequence assembly.
New: Remove vectors from single chromatograms.
New: SEQUENCE ANALISYS - mark al bases with a confidence level (QV) below a specified threshold, in red.
New: Batch convert from chromatogram to Fasta with vector removal and automatic metadata integration.
New: Resizable chromatograms.
Full support for low quality sample ends editing.
100% compatible with Mac via Parallels/Bootcamp/VMWare.
Improved handling of corrupted/invalid ABI/SCF files.
Improved contig editor.
Improved file association.
Improved 'Assemble to reference'.
Improved log window.
Improved file handling: Before starting the contig, check if all files in the JobList are valid. Invalid samples are automatically removed from Job List so the assembly process can continue without human intervention. Build a list of invalid files and report it.
Improved user interface: new toolbar, improved embedded help, interactive help, workflow...
Improved sample viewer: 'Mark as trusted/un-trusted' can now be used also in Sample viewer window
New: Show error message while trying to open empty/invalid FASTA files
Improved: Correctly handle multiple contigs resulted when assembling to a reference.
Improved: menu 'Save as Fasta/Seq/Scf' was replaced with 'Save all as...' and 'Save selected as...'. Now the user can choose where to save the file.
New: Button to open Windows Explorer in contig's folder, after sequence assembly.
New: Remove vectors from single chromatograms.
New: SEQUENCE ANALISYS - mark al bases with a confidence level (QV) below a specified threshold, in red.
New: Batch convert from chromatogram to Fasta with vector removal and automatic metadata integration.
New: Resizable chromatograms.
Full support for low quality sample ends editing.
100% compatible with Mac via Parallels/Bootcamp/VMWare.
Improved handling of corrupted/invalid ABI/SCF files.
Improved contig editor.
Improved file association.
Improved 'Assemble to reference'.
Improved log window.
Improved file handling: Before starting the contig, check if all files in the JobList are valid. Invalid samples are automatically removed from Job List so the assembly process can continue without human intervention. Build a list of invalid files and report it.
Improved user interface: new toolbar, improved embedded help, interactive help, workflow...
Improved sample viewer: 'Mark as trusted/un-trusted' can now be used also in Sample viewer window
New: Show error message while trying to open empty/invalid FASTA files
Improved: Correctly handle multiple contigs resulted when assembling to a reference.
Improved: menu 'Save as Fasta/Seq/Scf' was replaced with 'Save all as...' and 'Save selected as...'. Now the user can choose where to save the file.
v2.10 (February, 4. 2008)
Batch assembly. Thousand of contigs can be assembled at once.
v2.7.33 (October, 1. 2007)
Batch assembly. Thousand of contigs can be assembled at once.
Distribution permissions for DNA BASER Sequence Assembler
You may distribute this software to your colleagues as long as it is complete and un-modified.
For web publishers and affiliates:
You may publish this software as long as it is complete and un-modified.
The information taken from the PAD file must be shown on your web site complete and un-modified. You must provide a link back to our web site.
You are not allowed to show ads (like Google ads) on the same page where our products are listed.
For web publishers and affiliates:
You may publish this software as long as it is complete and un-modified.
The information taken from the PAD file must be shown on your web site complete and un-modified. You must provide a link back to our web site.
You are not allowed to show ads (like Google ads) on the same page where our products are listed.
Featured DNA BASER Sequence Assembler 2.93 Vista Files
...nucleotides in a DNA sequence. You don`t...run it. Other software by Heracle BioSoft:...DNA Baser is an affordable...alternative for assembly of DNA sequences...supported are abi, scf and seq (or...bases in the contig are highlighted and...Baser based on Quality...Values of the trace files. Minimum input...
...is a bioinformatics software tool for analyzing...DNA and protein sequences....Its Windows interface makes sequence...analysis extremely easy. BioSeqAnalyzer,...the following operations: Alignment Scoring. Linear global...performed on both DNA and protein sequences....BioSeqAnalyzer brings to sequence analysis the following...
...track. Use Life Aligner Lite to improve...and personal roles. Free training videos. We...use." "The Life Aligner software is great...Allow the Life Aligner Lite Training Videos...
...Aligner lets you move...Now you can align it with the...
...your life or business and identify opportunities...track. Use Life Aligner to improve any...for Personal and Business Use. Integrated Coaching...Expert Personal & Business Development E-Courses including:...Start My Coaching Business Get My Priorities...My Part Time Business Change my Behaviors...mind. The Life Aligner Training Videos guided...